MUSCLE (3.7) multiple sequence alignment


NC_002645_HCoV-229E_inf-1_nsp9_1      NNEIMPGKMKVKATKGEG--DGGITSE-GNALYNNEGGRAFMYAYVTTKPGMKYVKWEHD
NC_005831_HCoV-NL63_AmsterdamI_n      NNEIMPGKLKQKPMKAEG--DGGVLGD-GNALYNTEGGKTFMYAYISNKADLKFVKWEYE
NC_002306_TGEV_PUR46-MAD_nsp9_11      NNEIMPGKLKERAVRASATLDGEAFGS-GKALMASESGKSFMYAFIASDNNLKYVKWESN
NC_003436_PEDV_CV777_nsp9_11868.      NNEIIPGKLKQRSIKAEG---DGIVGE-GKALYNNEGGRTFMYAFISDKPDLRVVKWEFD
DQ811787_PRCV_ISU-1_nsp9_11551..      NNEIMPGKLKERAVRASATLDGEAFGS-GKALMAAESGKSFMYAFIASDNNLKYVKWESN
AY994055_FIPV_79-1146_nsp9_11642      NNEILPGKLKEKAVKASATIDGDAYGS-GKALMASEGGKSFIYAFIASDSNLKYVKWESN
NC_009657_BtCoV-G1_BtCoV/512/200      NNEIIPSKIKQRPIKAEG---EGVVAD-GNALYSNEGGRTFMYAFISDKPDLKVVKWEFD
EF203064_Bat-CoV-HKU2_HKU2/GD/43      NNEIIPGKLKQRAVKAEG---DGFSTD-AKALYNTEGGHCFVYALIADKPDLKVVKWEYD
NC_005147_HCoV-OC43_OC43_nsp9_12      NNELMPAKLKIQVVNS-G-PDQTCNTP-TQCYYNNSNNGKIVYAILSDVDGLKYTKILKD
NC_006577_CoV-HKU1A_N1_nsp9_1283      NNELMPHKLKIQVVNS-G-SDMNCNIP-TQCYYNNGSSGRIVYAVLSDVDGLKYTKIMKD
AY884001_CoV-HKU1B_N2_nsp9_12740      NNELMPHKLKIQVVNS-G-SDMNCNIP-TQCYYNNGSSGRIVYAVLSDVDGLKYTKIIKD
DQ339101_CoV-HKU1C_N5_nsp9_12680      NNELMPHKLKIQVVNS-G-SDINCNIP-TQCYYNNVSSGRIVYAVLSDVDGLKYTKIMKD
NC_003045_BCoV_BCoV-ENT_nsp9_125      NNELMPAKLKTQVVNS-G-PDQTCNTP-TQCYYNNSNNGKIVYAILSDVDGLKYTKILKD
NC_001846_MHV_MHV-A59_nsp9_12837      NNELMPQKLRTQVVNS-G-SDMNCNTP-TQCYYNTTGTGKIVYAILSDCDGLKYTKIVKE
NC_007732_PHEV_VW572_nsp9_12577.      NNELMPAKLKTQVVNS-G-PDQTCNTP-TLCYYNNSNNGKIVYAILSDVDGLKYTKILKD
EF424621_AntelopeCoV_US/OH1/2003      NNELMPAKLKTQVVNS-G-PDQTCNTP-TQCYYNNSNNGKIVYAILSDVDGLKYTKILKD
EF424622_GiCoV_US/OH3-TC/2006_ns      NNELMPAKLKTQVVNS-G-PDQTCNTP-TQCYYNNSNNGKIVYAILSDVDGLKYTKILKD
NC_004718_SARS-human_Tor2_nsp9_1      NNELSPVALRQMSCAA-GTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKS
AY304488_SARS-civet_SZ16_nsp9_12      NNELSPVALRQMSCAA-GTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKS
NC_009694_SARS-bat_HKU3-1_nsp9_1      NNELSPVALRQMSCAA-GTTQTACTDDNALAYYNNAKGGRFVLALLSDHQDLKWARFPKS
AY545919_SARS-badger_CFB/SZ/94/0      NNELSPVALRQMSCAA-GTTQTACTDDNALAYYNNSKGGRFVLALLSDHQDLKWARFPKS
NC_009019_Bat-CoV-HKU4_B04f           NNEIHPKGLKTMVITA-GVDQVNCNSS-AVAYYEPVQGHRMVMGLLSENAHLKWAKVEGK
NC_009020_Bat-CoV-HKU5_LMH3f          NNEIRPSGLKTMVVSA-GIDHANCNTS-SLAYYEPVEGRKMLMGILSENAHLKWAKVEGR
NC_009021_Bat-CoV-HKU9_BF_005I        NNELMPQTVKRMNVVA-GVSQTACVTD-AVAYYNATKEGRHVMAILADTDGLAFAKVEKS
NC_001451_IBV_Beaudette_nsp9_115      NNELMPHGVKTKACVA-GVDQAHCSVE-SKCYYTNISGNSVVAAITSSNPNLKVASFLNE
AY646283_IBV-partridge_Partridge      NNELMPHGVKTKACVA-GVDQAHCSVE-SKCYYTNISGNSVVAAITSSNPNLKVASFLNE
AY641576_IBV-peafowl_Peafowl/GD/      NNELMPHGVKTKACVA-GVDQAHCSVE-SKCYYTSISGSSVVAAITSSNPNLKVASFLNE
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NC_002645_HCoV-229E_inf-1_nsp9_1      SG--VVTVELEPPCRFVIDTPTGPQIKYLYFVKNLNNLRRGAVLGYIGATVRLQ
NC_005831_HCoV-NL63_AmsterdamI_n      GG--CNTIELDSPCRFMVETPNGPQVKYLYFVKNLNTLRRGAVLGFIGATIRLQ
NC_002306_TGEV_PUR46-MAD_nsp9_11      ND--IIPIELEAPLRFYVDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQ
NC_003436_PEDV_CV777_nsp9_11868.      GG--CNTIELEPPRKFLVDSPNGAQIKYLYFVRNLNTLRRGAVLGYIGATVRLQ
DQ811787_PRCV_ISU-1_nsp9_11551..      ND--IIPIELEAPLRFYVDGANGPEVKYLYFVKNLNTLRRGAVLGYIGATVRLQ
AY994055_FIPV_79-1146_nsp9_11642      ND--VIPIELEAPLRFYVDGVNGPEVKYLYFVKSLNTLRRGAVLGYIGATVRLQ
NC_009657_BtCoV-G1_BtCoV/512/200      GG--SNAIELEPPCKFLVEAPSGPVVKYLYFVRNLNNLRRGAVLGFIGATVRLQ
EF203064_Bat-CoV-HKU2_HKU2/GD/43      GG--CKTIELEPPLKFAVEAPTGVQIKYLYYVKNLNNLRRGATLGYIGATVRLQ
NC_005147_HCoV-OC43_OC43_nsp9_12      DGN-FVVLELDPPCKFTVQDAKGLKIKYLYFVKGCNTLARGWVVGTISSTVRLQ
NC_006577_CoV-HKU1A_N1_nsp9_1283      DGN-CVVLELDPPCKFSIQDVKGLKIKYLYFIKGCNTLARGWVVGTLSSTIRLQ
AY884001_CoV-HKU1B_N2_nsp9_12740      DGN-CVVLELDPPCKFSIQDVKGLKIKYLYFIKGCNTLARGWVVGTLSSTIRLQ
DQ339101_CoV-HKU1C_N5_nsp9_12680      DGN-CVVLELDPPCKFSIQDVKGLKIKYLYFIKGCNTLARGWVVGTLSSTIRLQ
NC_003045_BCoV_BCoV-ENT_nsp9_125      DGN-FVVLELDPPCKFTVQDVKGLKIKYLYFVKGCNTLARGWVVGTISSTVRLQ
NC_001846_MHV_MHV-A59_nsp9_12837      DGN-CVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLARGWVVGTLSSTVRLQ
NC_007732_PHEV_VW572_nsp9_12577.      DGN-FVVLELDPPCKFTVQDVKGLKIKYLYFVKGCNTLARGWVVGTISSTVRLQ
EF424621_AntelopeCoV_US/OH1/2003      DGN-FVVLELDPPCKFTVQDVKGLKIKYLYFVKGCNTLARGWVVGTISSTVRLQ
EF424622_GiCoV_US/OH3-TC/2006_ns      DGN-FVVLELDPPCKFTVQDVKGLKIKYLYFVKGCNTLARGWVVGTISSTVRLQ
NC_004718_SARS-human_Tor2_nsp9_1      DGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
AY304488_SARS-civet_SZ16_nsp9_12      DGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
NC_009694_SARS-bat_HKU3-1_nsp9_1      DGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
AY545919_SARS-badger_CFB/SZ/94/0      DGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQ
NC_009019_Bat-CoV-HKU4_B04f           DG--FINIELQPPCKFLIAGPKGPEIRYLYFVKNLNNLHRGQLLGHIAATVRLQ
NC_009020_Bat-CoV-HKU5_LMH3f          DG--FVNIELQPPCKFLIAGPKGPEVRYLYFVKNLNNLHRGQLLGHIAATVRLQ
NC_009021_Bat-CoV-HKU9_BF_005I        TGDGFVILELEPPCKFMVDTPKGPALKYLYFTKGLKNLXRGTVLGTLACTVRLH
NC_001451_IBV_Beaudette_nsp9_115      AGN-QIYVDLDPPCKFGMKVGVKVEVVYLYFIKNTRSIVRGMVLGAISNVVVLQ
AY646283_IBV-partridge_Partridge      AGN-QIYVDLDPPCKFCMKVGDKVEVVYLYFIKNTRSIVRGMVLGAISNVVVLQ
AY641576_IBV-peafowl_Peafowl/GD/      AGN-QIYVDLDPPCKFGMKVGDKVEVVYLYFIKNTRSIVRGMVLGAISNVVVLQ
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